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Schema for humanHprdP2P
  Database: hg18    Primary Table: humanHprdP2P    Row Count: 3,093,463   Data last updated: 2009-03-04
Format description: Distance between two genes in expression space.
On download server: MariaDB table dump directory
fieldexampleSQL type description
query uc003sou.1varchar(255) Name of one gene
target uc003sou.1varchar(255) Name of other gene
distance 0float Distance in expression space, always >= 0

Connected Tables and Joining Fields
        hg18.bioCycPathway.kgID (via humanHprdP2P.query)
      hg18.ccdsKgMap.geneId (via humanHprdP2P.query)
      hg18.ceBlastTab.query (via humanHprdP2P.query)
      hg18.dmBlastTab.query (via humanHprdP2P.query)
      hg18.drBlastTab.query (via humanHprdP2P.query)
      hg18.foldUtr3.name (via humanHprdP2P.query)
      hg18.foldUtr5.name (via humanHprdP2P.query)
      hg18.gnfAtlas2Distance.query (via humanHprdP2P.query)
      hg18.gnfAtlas2Distance.target (via humanHprdP2P.query)
      hg18.gnfU95Distance.query (via humanHprdP2P.query)
      hg18.gnfU95Distance.target (via humanHprdP2P.query)
      hg18.humanVidalP2P.query (via humanHprdP2P.query)
      hg18.humanVidalP2P.target (via humanHprdP2P.query)
      hg18.humanWankerP2P.query (via humanHprdP2P.query)
      hg18.humanWankerP2P.target (via humanHprdP2P.query)
      hg18.keggPathway.kgID (via humanHprdP2P.query)
      hg18.kgAlias.kgID (via humanHprdP2P.query)
      hg18.kgColor.kgID (via humanHprdP2P.query)
      hg18.kgProtAlias.kgID (via humanHprdP2P.query)
      hg18.kgProtMap2.qName (via humanHprdP2P.query)
      hg18.kgSpAlias.kgID (via humanHprdP2P.query)
      hg18.kgTargetAli.qName (via humanHprdP2P.query)
      hg18.kgTxInfo.name (via humanHprdP2P.query)
      hg18.kgXref.kgID (via humanHprdP2P.query)
      hg18.knownBlastTab.query (via humanHprdP2P.query)
      hg18.knownBlastTab.target (via humanHprdP2P.query)
      hg18.knownCanonical.protein (via humanHprdP2P.query)
      hg18.knownCanonical.transcript (via humanHprdP2P.query)
      hg18.knownGene.name (via humanHprdP2P.query)
      hg18.knownGeneMrna.name (via humanHprdP2P.query)
      hg18.knownGenePep.name (via humanHprdP2P.query)
      hg18.knownIsoforms.transcript (via humanHprdP2P.query)
      hg18.knownToAllenBrain.name (via humanHprdP2P.query)
      hg18.knownToEnsembl.name (via humanHprdP2P.query)
      hg18.knownToGnf1h.name (via humanHprdP2P.query)
      hg18.knownToGnfAtlas2.name (via humanHprdP2P.query)
      hg18.knownToHInv.name (via humanHprdP2P.query)
      hg18.knownToHprd.name (via humanHprdP2P.query)
      hg18.knownToKeggEntrez.name (via humanHprdP2P.query)
      hg18.knownToLocusLink.name (via humanHprdP2P.query)
      hg18.knownToMupit.name (via humanHprdP2P.query)
      hg18.knownToPfam.name (via humanHprdP2P.query)
      hg18.knownToRefSeq.name (via humanHprdP2P.query)
      hg18.knownToSuper.gene (via humanHprdP2P.query)
      hg18.knownToTreefam.name (via humanHprdP2P.query)
      hg18.knownToU133.name (via humanHprdP2P.query)
      hg18.knownToU133Plus2.name (via humanHprdP2P.query)
      hg18.knownToU95.name (via humanHprdP2P.query)
      hg18.knownToVisiGene.name (via humanHprdP2P.query)
      hg18.mmBlastTab.query (via humanHprdP2P.query)
      hg18.rnBlastTab.query (via humanHprdP2P.query)
      hg18.scBlastTab.query (via humanHprdP2P.query)
      hg18.ucscScop.ucscId (via humanHprdP2P.query)
      knownGeneV39.bioCycPathway.kgID (via humanHprdP2P.query)
      knownGeneV39.ceBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.dmBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.drBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.foldUtr3.name (via humanHprdP2P.query)
      knownGeneV39.foldUtr5.name (via humanHprdP2P.query)
      knownGeneV39.gnfAtlas2Distance.query (via humanHprdP2P.query)
      knownGeneV39.gnfAtlas2Distance.target (via humanHprdP2P.query)
      knownGeneV39.kgAlias.kgID (via humanHprdP2P.query)
      knownGeneV39.kgColor.kgID (via humanHprdP2P.query)
      knownGeneV39.kgProtAlias.kgID (via humanHprdP2P.query)
      knownGeneV39.kgSpAlias.kgID (via humanHprdP2P.query)
      knownGeneV39.kgTargetAli.qName (via humanHprdP2P.query)
      knownGeneV39.kgXref.kgID (via humanHprdP2P.query)
      knownGeneV39.knownAttrs.kgID (via humanHprdP2P.query)
      knownGeneV39.knownBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.knownBlastTab.target (via humanHprdP2P.query)
      knownGeneV39.knownCanonical.protein (via humanHprdP2P.query)
      knownGeneV39.knownCanonical.transcript (via humanHprdP2P.query)
      knownGeneV39.knownCds.name (via humanHprdP2P.query)
      knownGeneV39.knownGene.name (via humanHprdP2P.query)
      knownGeneV39.knownGeneMrna.name (via humanHprdP2P.query)
      knownGeneV39.knownGenePep.name (via humanHprdP2P.query)
      knownGeneV39.knownIsoforms.transcript (via humanHprdP2P.query)
      knownGeneV39.knownToEnsembl.name (via humanHprdP2P.query)
      knownGeneV39.knownToGnfAtlas2.name (via humanHprdP2P.query)
      knownGeneV39.knownToHprd.name (via humanHprdP2P.query)
      knownGeneV39.knownToLocusLink.name (via humanHprdP2P.query)
      knownGeneV39.knownToMrna.name (via humanHprdP2P.query)
      knownGeneV39.knownToMrnaSingle.name (via humanHprdP2P.query)
      knownGeneV39.knownToMupit.name (via humanHprdP2P.query)
      knownGeneV39.knownToPfam.name (via humanHprdP2P.query)
      knownGeneV39.knownToRefSeq.name (via humanHprdP2P.query)
      knownGeneV39.knownToSuper.gene (via humanHprdP2P.query)
      knownGeneV39.knownToTag.name (via humanHprdP2P.query)
      knownGeneV39.knownToU133.name (via humanHprdP2P.query)
      knownGeneV39.knownToU95.name (via humanHprdP2P.query)
      knownGeneV39.knownToVisiGene.name (via humanHprdP2P.query)
      knownGeneV39.knownToWikipedia.name (via humanHprdP2P.query)
      knownGeneV39.mmBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.rnBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.scBlastTab.query (via humanHprdP2P.query)
      knownGeneV39.ucscScop.ucscId (via humanHprdP2P.query)
      hg18.knownToHprd.name (via humanHprdP2P.target)
      knownGeneV39.humanHprdP2P.target (via humanHprdP2P.target)
      knownGeneV39.knownToHprd.name (via humanHprdP2P.target)

Sample Rows
 
querytargetdistance
uc003sou.1uc003sou.10
uc003sou.1uc003ckp.21
uc003sou.1uc003ckq.21
uc003sou.1uc010hia.11
uc003sou.1uc003ckr.21
uc003sou.1uc003yhv.12
uc003sou.1uc002gim.22
uc003sou.1uc002gij.22
uc003sou.1uc003iwi.12
uc003sou.1uc003iwh.12

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.