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Configure Image - Genome Browser V501
 
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Display chromosome ideogram above main graphic
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Display labels to the left of items in tracks
Display description above each track
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Configure Tracks on UCSC Genome Browser: Chimp Feb. 2011 (CSAC 2.1.4/panTro4)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Gap Gap Locations
Assembly Assembly from Fragments
GC Percent GC Percent in 5-Base Windows
INSDC Accession at INSDC - International Nucleotide Sequence Database Collaboration
RefSeq Acc RefSeq Accession
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
Genscan Genes Genscan Gene Predictions
NCBI RefSeq RefSeq genes from NCBI
Other RefSeq Non-Chimp RefSeq Genes
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Ensembl Genes Ensembl Genes
Geneid Genes Geneid Gene Predictions
-   mRNA and EST    
Chimp mRNAs Chimp mRNAs from GenBank
Spliced ESTs Chimp ESTs That Have Been Spliced
Chimp ESTs Chimp ESTs Including Unspliced
Other mRNAs Non-Chimp mRNAs from GenBank
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
hg19 Chain/Net Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments
Bonobo Chain/Net Bonobo (Aug. 2015 (MPI-EVA panpan1.1/panPan2)), Chain and Net Alignments
Gorilla Chain/Net Gorilla (Mar. 2016 (GSMRT3/gorGor5)), Chain and Net Alignments
Rhesus Chain/Net Rhesus (Oct. 2010 (BGI CR_1.0/rheMac3)), Chain and Net Alignments
Tarsier Chain/Net Tarsier (Sep. 2013 (Tarsius_syrichta-2.0.1/tarSyr2)), Chain and Net Alignments
Rat Chain/Net Rat (Mar. 2012 (RGSC 5.0/rn5)), Chain and Net Alignments
Mouse Chain/Net Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
updated EVA SNP Short Genetic Variants from European Variant Archive
Interrupted Rpts Fragments of Interrupted Repeats Joined by RepeatMasker ID
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust