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Configure Image - Genome Browser V501
 
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Configure Tracks on UCSC Genome Browser: A. mellifera Jan. 2005 (Baylor 2.0/apiMel2)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Scaffolds Assembly Scaffolds
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
NCBI Genes NCBI Gene Models
Homologs (EMBL) Homology-based gene predictions (EMBL)
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
D. mel. Proteins D. melanogaster (Apr. 2004 (BDGP R4/dm2)) Proteins
Ensembl Genes Ensembl Genes
Geneid Genes Geneid Gene Predictions
Genscan Genes Genscan Gene Predictions
Other RefSeq Non-A. mellifera RefSeq Genes
UniProt UniProt SwissProt/TrEMBL Protein Annotations
Human Proteins Human(hg17) proteins mapped by chained tBLASTn
-   mRNA and EST    
Spliced ESTs A. mellifera ESTs That Have Been Spliced
A. mel. ESTs A. mellifera ESTs Including Unspliced
A. mel. mRNAs A. mellifera mRNAs from GenBank
Other mRNAs Non-A. mellifera mRNAs from GenBank
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
D. mel. Chain D. melanogaster (Apr. 2004 (BDGP R4/dm2)) Chained Alignments
D. mel. Net D. melanogaster (Apr. 2004 (BDGP R4/dm2)) Alignment Net
-   Variation and Repeats    
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
RepeatMasker Repeating Elements by RepeatMasker