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Configure Image - Genome Browser V501
 
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Configure Tracks on UCSC Genome Browser: Dog May 2005 (Broad/canFam2)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
BAC End Pairs BAC End Pairs
Uncertified Uncertified Assembly Regions
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Quality Scores Dog Sequencing Quality Scores
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
RefSeq Genes RefSeq Genes
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Ensembl Genes Ensembl Genes
Genscan Genes Genscan Gene Predictions
Human Proteins Human Proteins Mapped by Chained tBLASTn
N-SCAN N-SCAN Gene Predictions
Other RefSeq Non-Dog RefSeq Genes
tRNA Genes Transfer RNA Genes Identified with tRNAscan-SE
-   mRNA and EST    
PolyA-Seq Poly(A)-sequencing from Merck Research Laboratories
Dog ESTs Dog ESTs Including Unspliced
Dog mRNAs Dog mRNAs from GenBank
Other mRNAs Non-Dog mRNAs from GenBank
Spliced ESTs Dog ESTs That Have Been Spliced
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
NHGRI BiP ENCODE NHGRI Elnitski Bidirectional Promoters
-   Comparative Genomics    
Conservation 4-Way Multiz Alignment & Conservation
Panda Chain/Net Panda (Dec. 2009 (BGI-Shenzhen 1.0/ailMel1)), Chain and Net Alignments
Horse Chain/Net Horse (Sep. 2007 (Broad/equCab2)), Chain and Net Alignments
Cow Chain/Net Cow (Oct. 2011 (Baylor Btau_4.6.1/bosTau7)), Chain and Net Alignments
Rat Chain/Net Rat (Nov. 2004 (Baylor 3.4/rn4)), Chain and Net Alignments
Mouse Chain/Net Mouse (July 2007 (NCBI37/mm9)), Chain and Net Alignments
Marmoset Chain/Net Marmoset (March 2009 (WUGSC 3.2/calJac3)), Chain and Net Alignments
Cat Chain/Net Cat (Dec. 2008 (NHGRI/GTB V17e/felCat4)), Chain and Net Alignments
Chimp Chain/Net Chimp (Oct. 2010 (CGSC 2.1.3/panTro3)), Chain and Net Alignments
Human Chain/Net Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments
Opossum Chain/Net Opossum (Oct. 2006 (Broad/monDom5)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
SNPs (131) Simple Nucleotide Polymorphisms (dbSNP build 131)
Self Chain Chained Self-Alignments