Skip to main content
Schema for ensPep
  Database: myoLuc2    Primary Table: ensPep    Row Count: 20,719   Data last updated: 2021-05-25
Format description: The mRNA sequence that represents each UCSC Genes transcript.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSMLUT00000000002.2varchar(255) values Name of gene
seq MFQLPVNNLGSLRKARKTVKKILSDIG...longblob   mRNA sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      myoLuc2.ensGene.name (via ensPep.name)
      myoLuc2.ensGtp.transcript (via ensPep.name)
      myoLuc2.ensemblSource.name (via ensPep.name)
      myoLuc2.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSMLUT00000000002.2MFQLPVNNLGSLRKARKTVKKILSDIGLEYCKEHIEDFKQFEPNDFYLKNTTWEDVGLWDPSLTKNQDYRTKPFCCSACPFSSKFFSAYKSHFRNVHSEDFENRILLNCPYCTFNADKKTLETHIKIF ...
ENSMLUT00000000003.2MASKTANRTPPRSRREPAGRAPGRDKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTREVAEQLEKIYGSDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFI ...
ENSMLUT00000000004.2MTLLPGDNSDYDYSALSCTSDASSHPAFFPQSQSLKGVFYRRAQRLRPQDEPRQAGLPEDRRRRIIINVGGIKYSLPWTTLEEFPMTRLGQLKACTNFDDILNVCDDYDVTCNEFFFDRNPGAFGTIL ...
ENSMLUT00000000005.2QLTRPAQDLRMSMCMNCTTHGNEDMDVISHLIKIRLKPKVLLNHNMLCIRELLNAHKDNLGTTIKFVIFNELSNARNPNNMQILYTVLQHSAELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQT ...
ENSMLUT00000000006.2SGTSKSYSCFGYPLSIFFIVINEFCERFSYYGMKALLILYFTRFFKWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFSTIVSLSIVYTIGQAVTAVSSIHDLSDFDHDGTPNNLPLHVALCMIG ...
ENSMLUT00000000007.2GPAEVPMMSPNGSIPPIHVPLGYISQVIEDNTGVRRVVVTPQSPECYPPSYPSAMSPTHHLPPYLAHHPHYMQNSHTAYYPPVTGPGDMPPQFFPQHHLPPTLYEQEIIPLYGMSSYITREDQYIKPP ...
ENSMLUT00000000008.2MWNATRTEEPEEPGLNLTLPDLGWDAPPDNDSLADGLLPLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSRFRELRTTTNLYLSSMAFSDLLIFLCMPLDLVRLWQYRPWNFGDLLCKLFQFVSES ...
ENSMLUT00000000009.2MLRFFRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDSKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQITYHLDLIESDYFGLRFMDSAQVAHWLDVTKSIKKQVKIGSPYCLHFRVKFYSSEPN ...
ENSMLUT00000000012.2MSADRGGIRATQDKERAREVPGPGHPCQEMLSESKEMVPLGAAQESAYIKTELQEPHPEEALQEDKAQGAWSWGRRSQGSKEKAPLLPGGALPSPQIPVLSHEGRTRDRQMAAALLTAWSQNGLALAD ...
ENSMLUT00000000013.2MSADRGGIRATQDKERAREVSGPGHPYQEMLSESKEMVPLGAAQESAYIKTELQEPHPEEALQEDKAQGAWSWGRRSQGSKEKAPLLPGGALPSPQIPVLSHEGRTRDRQMAAALLTAWSQNGLALAD ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.