Skip to main content
Schema for ensPep
  Database: felCat3    Primary Table: ensPep    Row Count: 15,048   Data last updated: 2012-08-24
Format description: The mRNA sequence that represents each UCSC Genes transcript.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSFCAT00000000001varchar(255) values Name of gene
seq MPILLFLIDTSASXXXXXXXXXXXXXX...longblob   mRNA sequence

Connected Tables and Joining Fields
        felCat3.ensGene.name (via ensPep.name)
      felCat3.ensGtp.transcript (via ensPep.name)
      felCat3.ensemblSource.name (via ensPep.name)
      felCat3.ensemblToGeneName.name (via ensPep.name)
      knownGeneV39.knownToEnsembl.value (via ensPep.name)

Sample Rows
 
nameseq
ENSFCAT00000000001MPILLFLIDTSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWKENHATFMSELKNLQASGLTTLGQALRSSFDLLNLNRLISGIDNYGQGRNPFFLEPSILITI ...
ENSFCAT00000000002MTDKAEESAVGPENQMKRHGEHDFPLCKRRLTMAMLSVMPEGEGASEAGDSAVCLEDEPMNMAGDGISSSQSDSLPRDLTRLSKGGPSHKPGSNALAGGIITIRLSTDDPEGRETAKNETTVERKHQL ...
ENSFCAT00000000003MKEDNQSSTLEFILLGVTGQQAQEDFFFIFFLFIYPITLTGNLLIILAIRSDIRLHNPMYFFLANLSSVDILFSSVTIPKMLANHVLHSKSISFGGCLTQMYFMIALGNTDSYILAVMAYDRAMAISR ...
ENSFCAT00000000004MRRDNQSFALGFILLGLTGQQQQENFFFILFLFIYPITLIGNLLIILAIHSDIHLHNPMYFFLANLSFVDILFSSVTIPKMLANHVLGSKAISFGGCLTQMYFMIDMSNTDSYILAVMAYDRAVAISC ...
ENSFCAT00000000005IINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRSRSDSVDYGQTHYYHQRQNSDDKLNGWQNSR ...
ENSFCAT00000000007MSGPLQKLAGGLRVAYTFPPCPSAGKPSRGRMRSSCVLLTALVALAAYYIYIPLPSSVSDPWKLMLLDATFRSAQQVSNLIHYLGLSHHLLAMNFIIVSFGKKSAWSSLQVKVTDTDFDGVEVRVFEG ...
ENSFCAT00000000008MLSRLFRMHGLFVASHPWEVIVGTVTLTICMMSMNMFTGNDKICGWNYECPKFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALPFF ...
ENSFCAT00000000010TKKNMHARGRCKAPAPPLPRIPKPPSGEQXXXXXXXXXFLRWDFDLEAEIITFELQVRTAGWVGLGVTNRYTRVGSDLVVGGVLPDGNVYFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ...
ENSFCAT00000000011MVYLQSSPEPCVGTLIHPEWVLTAAHCPLPVKIRLGVYQPSVKNKKEQIR
ENSFCAT00000000013MAATKRKRRGGLAVQAKKPKRNEKDAKQPAKLRDVAEETKEEERDRIPGPVCKGKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKAXXXXXXXXXXXXXXXVCEMKNCNKCIYFEAKKKQDLYM ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.