Schema for wgEncodeGencodeExonSupportVM38

Database: mm39 Primary Table: wgEncodeGencodeExonSupportVM38 Row Count: 7,246,470 Data last updated: 2025-09-09
Format description: GENCODE exon support from other datasets
On download server: MariaDB table dump directory

field	example	SQL type	description
`transcriptId`	ENSMUST00000194081.2	`varchar(255)`	GENCODE transcript identifier
`seqId`	AK038167.1	`varchar(255)`	Identifier of sequence supporting transcript
`seqSrc`	EMBL	`varchar(255)`	Source of supporting sequence
`exonId`	ENSMUSE00001337335.2	`varchar(255)`	GENCODE exon identifier (not stable)
`chrom`	chr1	`varchar(255)`	Chromosome
`chromStart`	108344806	`int(10) unsigned`	Start position in chromosome
`chromEnd`	108347562	`int(10) unsigned`	End position in chromosome

Connected Tables and Joining Fields


	mm39.wgEncodeGencodeAttrsVM38.transcriptId (via wgEncodeGencodeExonSupportVM38.transcriptId)

Sample Rows

transcriptId	seqId	seqSrc	exonId	chrom	chromStart	chromEnd
ENSMUST00000194081.2	AK038167.1	EMBL	ENSMUSE00001337335.2	chr1	108344806	108347562
ENSMUST00000194393.2	P23497.3	Uniprot/SWISSPROT	ENSMUSE00001339893.2	chr1	6980783	6981446
ENSMUST00000194393.2	A9RA84.1	Uniprot/SWISSPROT	ENSMUSE00001339893.2	chr1	6980783	6981446
ENSMUST00000194393.2	P09429.3	Uniprot/SWISSPROT	ENSMUSE00001339893.2	chr1	6980783	6981446
ENSMUST00000185509.2	P70124.1	Uniprot/SWISSPROT	ENSMUSE00001325295.2	chr1	108540066	108540244
ENSMUST00000191467.2	Q80TQ2-2.2	Uniprot/Varsplic	ENSMUSE00001335952.2	chr1	108697864	108699733
ENSMUST00000186289.2	AV273106.1	EMBL	ENSMUSE00001334242.2	chr1	43782985	43783055
ENSMUST00000186289.2	AV259356.1	EMBL	ENSMUSE00001334242.2	chr1	43782985	43783055
ENSMUST00000186289.2	AV273106.1	EMBL	ENSMUSE00001327336.2	chr1	43781120	43781266
ENSMUST00000186289.2	AV259356.1	EMBL	ENSMUSE00001327336.2	chr1	43781120	43781266

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.