Schema for wgEncodeGencodeEntrezGeneVM38

Database: mm39 Primary Table: wgEncodeGencodeEntrezGeneVM38 Row Count: 152,025 Data last updated: 2025-09-09
Format description: The NCBI Entrez gene id associated with GENCODE transcript annotation
On download server: MariaDB table dump directory

field	example	SQL type	info	description
`transcriptId`	ENSMUST00000000001.5	`varchar(255)`	values	GENCODE transcript identifier
`entrezGeneId`	14679	`int(11)`	range	Entrez gene id

Connected Tables and Joining Fields


	mm39.wgEncodeGencodeAttrsVM38.transcriptId (via wgEncodeGencodeEntrezGeneVM38.transcriptId)

Sample Rows

transcriptId	entrezGeneId
ENSMUST00000000001.5	14679
ENSMUST00000000003.14	54192
ENSMUST00000000010.9	15417
ENSMUST00000000028.14	12544
ENSMUST00000000033.12	16002
ENSMUST00000000049.6	11818
ENSMUST00000000058.7	12390
ENSMUST00000000080.8	23849
ENSMUST00000000087.13	29871
ENSMUST00000000090.8	12858

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.