Schema for rnBlastTab

Database: mm10 Primary Table: rnBlastTab Row Count: 57,012 Data last updated: 2019-09-20
Format description: Blast alignments of Rat genes
On download server: MariaDB table dump directory

field	example	SQL type	info	description
`query`	ENSMUST00000070533.4	`varchar(255)`	values	Name of sequence in this assembly (query)
`target`	ENSRNOT00000029503.6	`varchar(255)`	values	Name of sequence in other assembly (target)
`identity`	98.08	`float`	range	Percent identity
`aliLength`	521	`int(10) unsigned`	range	Length of alignment
`mismatch`	10	`int(10) unsigned`	range	Number of mismatches
`gapOpen`	0	`int(10) unsigned`	range	Number of gap openings
`qStart`	126	`int(10) unsigned`	range	Start in query (0 based)
`qEnd`	647	`int(10) unsigned`	range	End in query (non-inclusive)
`tStart`	126	`int(10) unsigned`	range	Start in target (0 based)
`tEnd`	647	`int(10) unsigned`	range	End in target (non-inclusive)
`eValue`	0	`double`	range	Expectation value
`bitScore`	973	`double`	range	Bit score