Skip to main content
Schema for wgEncodeGencodeEntrezGeneV46lift37
  Database: hg19    Primary Table: wgEncodeGencodeEntrezGeneV46lift37    Row Count: 199,677   Data last updated: 2024-05-14
Format description: The NCBI Entrez gene id associated with GENCODE transcript annotation
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000000233.10_4varchar(255) values GENCODE transcript identifier
entrezGeneId 381int(11) range Entrez gene id

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeAttrsV46lift37.transcriptId (via wgEncodeGencodeEntrezGeneV46lift37.transcriptId)

Sample Rows
 
transcriptIdentrezGeneId
ENST00000000233.10_4381
ENST00000000442.11_82101
ENST00000001008.6_42288
ENST00000001146.7_756603
ENST00000002125.9_455471
ENST00000002165.11_72519
ENST00000002501.11_679007
ENST00000002596.6_79957
ENST00000002829.8_66405
ENST00000003084.11_51080

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.