Skip to main content
Schema for wgEncodeGencodeEntrezGeneV38
  Database: hg38    Primary Table: wgEncodeGencodeEntrezGeneV38    Row Count: 201,291   Data last updated: 2021-09-25
Format description: The NCBI Entrez gene id associated with GENCODE transcript annotation
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000000233.10varchar(255) values GENCODE transcript identifier
entrezGeneId 381int(11) range Entrez gene id

Connected Tables and Joining Fields
        hg38.wgEncodeGencodeAttrsV38.transcriptId (via wgEncodeGencodeEntrezGeneV38.transcriptId)

Sample Rows
 
transcriptIdentrezGeneId
ENST00000000233.10381
ENST00000000412.84074
ENST00000000442.112101
ENST00000001008.62288
ENST00000001146.756603
ENST00000002125.955471
ENST00000002165.112519
ENST00000002501.1179007
ENST00000002596.69957
ENST00000002829.86405

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.