Schema for scopDesc

Database: mm39 Primary Table: scopDesc Row Count: 2,019 Data last updated: 2025-09-17
Format description: Structural Classification of Proteins Description 2
On download server: MariaDB table dump directory

field	example	SQL type	info	description
`acc`	100879	`varchar(255)`	values	Unique integer
`name`	d.240.1	`varchar(255)`	values	Name of domain.
`description`	Lesion bypass DNA polymeras...	`varchar(255)`	values	Descriptive text.

Connected Tables and Joining Fields


	knownGeneV39.scopDesc.name (via scopDesc.name) knownGeneV39.ucscScop.domainName (via scopDesc.name) mm39.ucscScop.domainName (via scopDesc.name)

Sample Rows

acc	name	description
100879	d.240.1	Lesion bypass DNA polymerase (Y-family), little finger domain
100895	g.68.1	Kazal-type serine protease inhibitors
100897	g.69.1	Plant proteinase inhibitors
100909	a.118.22	IP3 receptor type 1 binding core, domain 2
100910	a.118.21	Chemosensory protein Csp2
100920	b.130.1	Heat shock protein 70kD (HSP70), peptide-binding domain
100934	a.8.4	Heat shock protein 70kD (HSP70), C-terminal subdomain
100939	b.131.1	SPOC domain-like
100950	c.124.1	NagB/RpiA/CoA transferase-like
100957	a.34.2	Dimerization cofactor of HNF-1 alpha

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.