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Schema for wgEncodeGencodePdbV49lift37
  Database: hg19    Primary Table: wgEncodeGencodePdbV49lift37    Row Count: 338,220   Data last updated: 2025-09-09
Format description: GENCODE transcript to Protein Data Bank (PDB) protein structure mapping
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000327044.7_8varchar(255) values GENCODE transcript identifier
pdbId 8FKVvarchar(255) values Protein Data Bank (PDB) identifier

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeAttrsV49lift37.transcriptId (via wgEncodeGencodePdbV49lift37.transcriptId)

Sample Rows
 
transcriptIdpdbId
ENST00000327044.7_88FKV
ENST00000327044.7_88FKW
ENST00000327044.7_88FKX
ENST00000327044.7_88FKY
ENST00000338591.8_46HRL
ENST00000649529.1_51Z2M
ENST00000649529.1_52HJ8
ENST00000649529.1_53PHX
ENST00000649529.1_53PSE
ENST00000649529.1_53R66

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.