Skip to main content
Schema for wgEncodeGencodeEntrezGeneV34lift37
  Database: hg19    Primary Table: wgEncodeGencodeEntrezGeneV34lift37    Row Count: 151,670   Data last updated: 2020-04-29
Format description: The NCBI Entrez gene id associated with GENCODE transcript annotation
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000000233.10_2varchar(255) values GENCODE transcript identifier
entrezGeneId 381int(11) range Entrez gene id

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeAttrsV34lift37.transcriptId (via wgEncodeGencodeEntrezGeneV34lift37.transcriptId)

Sample Rows
 
transcriptIdentrezGeneId
ENST00000000233.10_2381
ENST00000000442.11_32101
ENST00000001008.6_22288
ENST00000001146.6_256603
ENST00000002125.9_255471
ENST00000002165.11_32519
ENST00000002501.11_279007
ENST00000002596.6_39957
ENST00000002829.8_36405
ENST00000003084.11_21080

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.